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[message] Brief Description [PDF] Computational Biology, 2nd Edition Free Download by Röbbe Wunschiers | Publisher : Springer | Category : C...

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    • Brief Description
      • [PDF] Computational Biology, 2nd Edition Free Download by Röbbe Wunschiers | Publisher : Springer | Category : Computers & Internet | Tags : Biology, Management, Visualization, Modeling, Software, Operating Systems | ISBN-10 : 3642347487 | ISBN-13 : 9783642347481
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      • Computational Biology, 2nd Edition by Röbbe Wunschiers, Publisher : Springer
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      • Computational Biology: A Practical Introduction to BioData Processing and Analysis with Linux, MySQL, and R

        This greatly expanded 2nd edition provides a practical introduction to

        • data processing with Linux tools and the programming languages AWK and Perl
        • data management with the relational database system MySQL, and
        • data analysis and visualization with the statistical computing environment R

        for students and practitioners in the life sciences. Although written for beginners, experienced researchers in areas involving bioinformatics and computational biology may benefit from numerous tips and tricks that help to process, filter and format large datasets. Learning by doing is the basic concept of this book. Worked examples illustrate how to employ data processing and analysis techniques, e.g. for

        • finding proteins potentially causing pathogenicity in bacteria,
        • supporting the significance of BLAST with homology modeling, or
        • detecting candidate proteins that may be redox-regulated, on the basis of their structure.

        All the software tools and datasets used are freely available. One section is devoted to explaining setup and maintenance of Linux as an operating system independent virtual machine. The author’s experiences and knowledge gained from working and teaching in both academia and industry constitute the foundation for this practical approach.

        Table of Contents

        Part I Whetting Your Appetit
        1 Introduction
        2 Content of This Book

        Part II Computer and Operating Systems
        3 Unix/Linux

        Part III Working with Linux
        4 The First Touch
        5 Working with Files
        6 Remote Connections
        7 Playing with Text and Data Files
        8 Using the Shell
        9 Installing BLAST and ClustalW
        10 Shell Programming
        11 Regular Expressions
        12 Sed

        Part IV Programming
        13 AWK
        14 Perl
        15 Other Programming Languages

        Part V Advanced Data Analysis
        16 Relational Databases with MySQL
        17 The Statistics Suite R

        Part VI Worked Examples
        18 Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4
        19 Limits of BLAST and Homology Modeling
        20 Virtual Sequencing of pUC18c
        21 Querying for Potential Redox-Regulated Enzymes

        Appendix A Supplementary Information

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    • Book Details
      • Book Name : Computational Biology, 2nd Edition

        Edition : 2

        Author : Röbbe Wunschiers

        Publisher : Springer

        Category : Computers & Internet

        ISBN-10 : 3642347487

        ISBN-13 : 9783642347481

        ASIN : 3642347487

        Pages : 493

        Language : English

        Publish Date : January 31, 2013
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